Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
BRCA2P51587 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 AC108734.2-201ENST00000420887 1069 ntBASIC16.42■□□□□ 0.22
BRCA2P51587 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.42■□□□□ 0.22
BRCA2P51587 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRCA2P51587 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.42■□□□□ 0.22
BRCA2P51587 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCA2P51587 AC113347.2-201ENST00000512350 279 ntBASIC16.42■□□□□ 0.22
BRCA2P51587 AL603832.2-201ENST00000566195 2125 ntBASIC16.42■□□□□ 0.22
BRCA2P51587 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BRCA2P51587 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCA2P51587 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCA2P51587 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCA2P51587 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.41■□□□□ 0.22
BRCA2P51587 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 OR2R1P-201ENST00000441404 914 ntBASIC16.41■□□□□ 0.22
BRCA2P51587 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.41■□□□□ 0.22
BRCA2P51587 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCA2P51587 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.41■□□□□ 0.22
BRCA2P51587 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCA2P51587 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCA2P51587 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.41■□□□□ 0.22
BRCA2P51587 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 AL137077.2-201ENST00000635124 1608 ntBASIC16.41■□□□□ 0.22
BRCA2P51587 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCA2P51587 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.41■□□□□ 0.22
BRCA2P51587 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCA2P51587 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 FAM86B3P-203ENST00000523992 854 ntBASIC16.41■□□□□ 0.22
BRCA2P51587 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
BRCA2P51587 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
BRCA2P51587 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.41■□□□□ 0.22
BRCA2P51587 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCA2P51587 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCA2P51587 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 AC133540.1-201ENST00000620845 1019 ntBASIC16.41■□□□□ 0.22
BRCA2P51587 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCA2P51587 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
BRCA2P51587 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.4■□□□□ 0.22
BRCA2P51587 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.4■□□□□ 0.22
BRCA2P51587 DPY19L2P5-201ENST00000456300 331 ntBASIC16.4■□□□□ 0.22
BRCA2P51587 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.4■□□□□ 0.22
BRCA2P51587 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BRCA2P51587 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCA2P51587 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
BRCA2P51587 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
BRCA2P51587 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.4■□□□□ 0.22
BRCA2P51587 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
BRCA2P51587 RPL14-203ENST00000416518 812 ntTSL 3 BASIC16.4■□□□□ 0.22
BRCA2P51587 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCA2P51587 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.4■□□□□ 0.22
BRCA2P51587 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCA2P51587 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.4■□□□□ 0.22
BRCA2P51587 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCA2P51587 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCA2P51587 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.4■□□□□ 0.22
BRCA2P51587 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms