Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CENPFP49454 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.6■□□□□ 0.25
CENPFP49454 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.6■□□□□ 0.25
CENPFP49454 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.6■□□□□ 0.25
CENPFP49454 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.6■□□□□ 0.25
CENPFP49454 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.6■□□□□ 0.25
CENPFP49454 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.6■□□□□ 0.25
CENPFP49454 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CENPFP49454 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.6■□□□□ 0.25
CENPFP49454 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.6■□□□□ 0.25
CENPFP49454 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.6■□□□□ 0.25
CENPFP49454 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.6■□□□□ 0.25
CENPFP49454 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CENPFP49454 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CENPFP49454 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.6■□□□□ 0.25
CENPFP49454 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.6■□□□□ 0.25
CENPFP49454 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CENPFP49454 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.6■□□□□ 0.25
CENPFP49454 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.6■□□□□ 0.25
CENPFP49454 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CENPFP49454 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
CENPFP49454 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CENPFP49454 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.59■□□□□ 0.25
CENPFP49454 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CENPFP49454 AL592076.1-201ENST00000424448 303 ntBASIC16.59■□□□□ 0.25
CENPFP49454 AC063952.3-201ENST00000467756 308 ntBASIC16.59■□□□□ 0.25
CENPFP49454 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.59■□□□□ 0.25
CENPFP49454 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.59■□□□□ 0.25
CENPFP49454 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.59■□□□□ 0.25
CENPFP49454 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.59■□□□□ 0.25
CENPFP49454 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.59■□□□□ 0.25
CENPFP49454 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.59■□□□□ 0.25
CENPFP49454 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.59■□□□□ 0.25
CENPFP49454 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.59■□□□□ 0.25
CENPFP49454 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.59■□□□□ 0.25
CENPFP49454 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.59■□□□□ 0.25
CENPFP49454 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.59■□□□□ 0.25
CENPFP49454 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CENPFP49454 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CENPFP49454 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.58■□□□□ 0.25
CENPFP49454 AC138701.2-201ENST00000553634 226 ntBASIC16.58■□□□□ 0.25
CENPFP49454 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.58■□□□□ 0.25
CENPFP49454 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.58■□□□□ 0.25
CENPFP49454 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.58■□□□□ 0.25
CENPFP49454 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.58■□□□□ 0.25
CENPFP49454 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CENPFP49454 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CENPFP49454 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CENPFP49454 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CENPFP49454 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
CENPFP49454 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.58■□□□□ 0.25
CENPFP49454 TMBIM7P-202ENST00000641474 1516 ntBASIC16.58■□□□□ 0.25
CENPFP49454 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.58■□□□□ 0.25
CENPFP49454 AC003102.2-201ENST00000589195 1469 ntBASIC16.58■□□□□ 0.24
CENPFP49454 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.58■□□□□ 0.24
CENPFP49454 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.58■□□□□ 0.24
CENPFP49454 AC053503.3-201ENST00000448375 114 ntBASIC16.58■□□□□ 0.24
CENPFP49454 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.58■□□□□ 0.24
CENPFP49454 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC16.58■□□□□ 0.24
CENPFP49454 AP005212.2-201ENST00000584979 510 ntBASIC16.58■□□□□ 0.24
CENPFP49454 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.58■□□□□ 0.24
CENPFP49454 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.58■□□□□ 0.24
CENPFP49454 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.58■□□□□ 0.24
CENPFP49454 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.58■□□□□ 0.24
CENPFP49454 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CENPFP49454 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CENPFP49454 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CENPFP49454 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.58■□□□□ 0.24
CENPFP49454 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.58■□□□□ 0.24
CENPFP49454 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.58■□□□□ 0.24
CENPFP49454 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms