Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARCN1P48444 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 AC018665.1-201ENST00000622927 1362 ntBASIC15.15■□□□□ 0.02
ARCN1P48444 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ARCN1P48444 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.15■□□□□ 0.02
ARCN1P48444 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 GAPDHP21-201ENST00000450301 1010 ntBASIC15.15■□□□□ 0.02
ARCN1P48444 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.15■□□□□ 0.02
ARCN1P48444 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.15■□□□□ 0.02
ARCN1P48444 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.15■□□□□ 0.02
ARCN1P48444 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.15■□□□□ 0.02
ARCN1P48444 AC132938.2-201ENST00000579188 680 ntBASIC15.15■□□□□ 0.02
ARCN1P48444 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 TMEM261P1-201ENST00000604899 340 ntBASIC15.15■□□□□ 0.02
ARCN1P48444 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.15■□□□□ 0.02
ARCN1P48444 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 AL591163.1-201ENST00000641757 987 ntBASIC15.15■□□□□ 0.02
ARCN1P48444 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARCN1P48444 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ARCN1P48444 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ARCN1P48444 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.14■□□□□ 0.01
ARCN1P48444 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 BX640514.1-201ENST00000583223 1918 ntBASIC15.14■□□□□ 0.01
ARCN1P48444 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 RNU1-114P-201ENST00000365297 166 ntBASIC15.14■□□□□ 0.01
ARCN1P48444 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
ARCN1P48444 KRT17P7-201ENST00000451704 1104 ntBASIC15.14■□□□□ 0.01
ARCN1P48444 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.14■□□□□ 0.01
ARCN1P48444 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.14■□□□□ 0.01
ARCN1P48444 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.14■□□□□ 0.01
ARCN1P48444 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.14■□□□□ 0.01
ARCN1P48444 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.14■□□□□ 0.01
ARCN1P48444 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.14■□□□□ 0.01
ARCN1P48444 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ARCN1P48444 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARCN1P48444 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms