Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL12P48061 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL12P48061 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL12P48061 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CXCL12P48061 BANF1P3-201ENST00000412556 261 ntBASIC14.86□□□□□ -0.03
CXCL12P48061 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.86□□□□□ -0.03
CXCL12P48061 DUTP3-201ENST00000450025 415 ntBASIC14.86□□□□□ -0.03
CXCL12P48061 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CXCL12P48061 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.86□□□□□ -0.03
CXCL12P48061 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL12P48061 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL12P48061 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL12P48061 AC003102.2-201ENST00000589195 1469 ntBASIC14.86□□□□□ -0.03
CXCL12P48061 CICP13-201ENST00000422015 2789 ntBASIC14.86□□□□□ -0.03
CXCL12P48061 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL12P48061 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.86□□□□□ -0.03
CXCL12P48061 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CXCL12P48061 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL12P48061 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL12P48061 AC009090.5-201ENST00000624886 2285 ntBASIC14.86□□□□□ -0.03
CXCL12P48061 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.86□□□□□ -0.03
CXCL12P48061 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL12P48061 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL12P48061 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CXCL12P48061 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CXCL12P48061 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL12P48061 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL12P48061 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CXCL12P48061 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL12P48061 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 AL807761.2-201ENST00000422849 729 ntBASIC14.85□□□□□ -0.03
CXCL12P48061 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.85□□□□□ -0.03
CXCL12P48061 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL12P48061 RPSAP15-201ENST00000448168 861 ntBASIC14.85□□□□□ -0.03
CXCL12P48061 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL12P48061 RPL18AP3-201ENST00000462885 528 ntBASIC14.85□□□□□ -0.03
CXCL12P48061 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL12P48061 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.85□□□□□ -0.03
CXCL12P48061 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCL12P48061 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CXCL12P48061 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 MIR4522-201ENST00000584932 87 ntBASIC14.85□□□□□ -0.03
CXCL12P48061 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL12P48061 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.85□□□□□ -0.03
CXCL12P48061 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL12P48061 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CXCL12P48061 AC007326.1-201ENST00000604539 458 ntBASIC14.85□□□□□ -0.03
CXCL12P48061 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.85□□□□□ -0.03
CXCL12P48061 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCL12P48061 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL12P48061 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CXCL12P48061 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CXCL12P48061 LINC01165-201ENST00000445190 1623 ntBASIC14.84□□□□□ -0.03
CXCL12P48061 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL12P48061 AL359258.3-201ENST00000622910 2331 ntBASIC14.84□□□□□ -0.03
CXCL12P48061 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL12P48061 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL12P48061 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL12P48061 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 MIR557-201ENST00000385239 98 ntBASIC14.84□□□□□ -0.03
CXCL12P48061 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCL12P48061 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL12P48061 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.84□□□□□ -0.03
CXCL12P48061 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCL12P48061 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL12P48061 AL645933.1-201ENST00000440087 609 ntBASIC14.84□□□□□ -0.03
CXCL12P48061 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL12P48061 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL12P48061 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.84□□□□□ -0.03
CXCL12P48061 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms