Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 ACTG1P3-201ENST00000431775 1114 ntBASIC12.4□□□□□ -0.42
CEACAM3P40198 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CEACAM3P40198 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CEACAM3P40198 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.4□□□□□ -0.42
CEACAM3P40198 AL596325.1-201ENST00000563991 1082 ntBASIC12.4□□□□□ -0.42
CEACAM3P40198 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.4□□□□□ -0.42
CEACAM3P40198 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.4□□□□□ -0.42
CEACAM3P40198 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.4□□□□□ -0.42
CEACAM3P40198 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 REXO1L4P-201ENST00000605109 1937 ntBASIC12.4□□□□□ -0.42
CEACAM3P40198 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
CEACAM3P40198 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.4□□□□□ -0.42
CEACAM3P40198 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.4□□□□□ -0.42
CEACAM3P40198 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CEACAM3P40198 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.4□□□□□ -0.42
CEACAM3P40198 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CEACAM3P40198 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CEACAM3P40198 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CEACAM3P40198 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CEACAM3P40198 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CEACAM3P40198 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CEACAM3P40198 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CEACAM3P40198 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.39□□□□□ -0.43
CEACAM3P40198 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CEACAM3P40198 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.39□□□□□ -0.43
CEACAM3P40198 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 AL139094.1-201ENST00000405549 1188 ntBASIC12.39□□□□□ -0.43
CEACAM3P40198 AL035633.1-201ENST00000406139 838 ntBASIC12.39□□□□□ -0.43
CEACAM3P40198 AL512384.1-201ENST00000406683 331 ntBASIC12.39□□□□□ -0.43
CEACAM3P40198 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.39□□□□□ -0.43
CEACAM3P40198 AL355864.2-201ENST00000447420 863 ntBASIC12.39□□□□□ -0.43
CEACAM3P40198 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.39□□□□□ -0.43
CEACAM3P40198 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CEACAM3P40198 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 TDH-203ENST00000531764 1110 ntBASIC12.39□□□□□ -0.43
CEACAM3P40198 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CEACAM3P40198 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 PRSS30P-206ENST00000641773 873 ntBASIC12.39□□□□□ -0.43
CEACAM3P40198 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
CEACAM3P40198 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CEACAM3P40198 AC013268.4-201ENST00000637413 2228 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 357.7 ms