Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.22■□□□□ 0.35
COPB2P35606 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
COPB2P35606 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.22■□□□□ 0.35
COPB2P35606 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COPB2P35606 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.22■□□□□ 0.35
COPB2P35606 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.22■□□□□ 0.35
COPB2P35606 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.22■□□□□ 0.35
COPB2P35606 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COPB2P35606 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COPB2P35606 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COPB2P35606 REXO1L4P-201ENST00000605109 1937 ntBASIC17.21■□□□□ 0.35
COPB2P35606 AC104640.1-201ENST00000562617 2109 ntBASIC17.21■□□□□ 0.35
COPB2P35606 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
COPB2P35606 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.21■□□□□ 0.35
COPB2P35606 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
COPB2P35606 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
COPB2P35606 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.21■□□□□ 0.35
COPB2P35606 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.21■□□□□ 0.35
COPB2P35606 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COPB2P35606 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.21■□□□□ 0.35
COPB2P35606 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.21■□□□□ 0.35
COPB2P35606 AC245884.6-201ENST00000515672 1067 ntBASIC17.21■□□□□ 0.35
COPB2P35606 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.21■□□□□ 0.35
COPB2P35606 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 MIR4683-201ENST00000579659 81 ntBASIC17.21■□□□□ 0.35
COPB2P35606 AC005324.6-201ENST00000587972 613 ntBASIC17.21■□□□□ 0.35
COPB2P35606 AC009955.4-201ENST00000597192 544 ntBASIC17.21■□□□□ 0.35
COPB2P35606 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
COPB2P35606 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.21■□□□□ 0.35
COPB2P35606 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COPB2P35606 SHC1P1-201ENST00000425230 1745 ntBASIC17.21■□□□□ 0.35
COPB2P35606 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COPB2P35606 CICP13-201ENST00000422015 2789 ntBASIC17.21■□□□□ 0.35
COPB2P35606 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COPB2P35606 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COPB2P35606 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COPB2P35606 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COPB2P35606 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.21■□□□□ 0.34
COPB2P35606 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.21■□□□□ 0.34
COPB2P35606 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.21■□□□□ 0.34
COPB2P35606 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COPB2P35606 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
COPB2P35606 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.21■□□□□ 0.34
COPB2P35606 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COPB2P35606 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.2■□□□□ 0.34
COPB2P35606 KRT8P19-201ENST00000551916 1455 ntBASIC17.2■□□□□ 0.34
COPB2P35606 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.2■□□□□ 0.34
COPB2P35606 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COPB2P35606 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.2■□□□□ 0.34
COPB2P35606 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.2■□□□□ 0.34
COPB2P35606 Z97180.1-201ENST00000445173 988 ntBASIC17.2■□□□□ 0.34
COPB2P35606 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.2■□□□□ 0.34
COPB2P35606 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
COPB2P35606 DUX4L46-201ENST00000566845 751 ntBASIC17.2■□□□□ 0.34
COPB2P35606 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COPB2P35606 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms