Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.2□□□□□ -0.62
CKS2P33552 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.2□□□□□ -0.62
CKS2P33552 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.2□□□□□ -0.62
CKS2P33552 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.2□□□□□ -0.62
CKS2P33552 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 AC087388.1-201ENST00000571370 1112 ntBASIC11.2□□□□□ -0.62
CKS2P33552 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.2□□□□□ -0.62
CKS2P33552 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 CLEC4GP1-201ENST00000596555 870 ntBASIC11.2□□□□□ -0.62
CKS2P33552 LINC01711-201ENST00000598340 967 ntBASIC11.2□□□□□ -0.62
CKS2P33552 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.2□□□□□ -0.62
CKS2P33552 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CKS2P33552 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CKS2P33552 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CKS2P33552 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS2P33552 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CKS2P33552 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS2P33552 AC099521.3-201ENST00000624251 2938 ntBASIC11.19□□□□□ -0.62
CKS2P33552 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 PPT1-213ENST00000641319 2388 ntBASIC11.19□□□□□ -0.62
CKS2P33552 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.19□□□□□ -0.62
CKS2P33552 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS2P33552 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.19□□□□□ -0.62
CKS2P33552 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 AC140658.5-201ENST00000438532 169 ntBASIC11.19□□□□□ -0.62
CKS2P33552 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 RNA5SP410-201ENST00000516285 106 ntBASIC11.19□□□□□ -0.62
CKS2P33552 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
CKS2P33552 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CKS2P33552 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.19□□□□□ -0.62
CKS2P33552 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS2P33552 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS2P33552 AC007787.1-201ENST00000588095 1583 ntBASIC11.19□□□□□ -0.62
CKS2P33552 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.19□□□□□ -0.62
CKS2P33552 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CKS2P33552 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
CKS2P33552 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CKS2P33552 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS2P33552 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CKS2P33552 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CKS2P33552 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS2P33552 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms