Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 AC105233.6-201ENST00000642093 218 ntBASIC13.93□□□□□ -0.18
SHC1P29353 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 AC140479.7-201ENST00000636301 2332 ntBASIC13.93□□□□□ -0.18
SHC1P29353 ZBED1P1-201ENST00000502364 1930 ntBASIC13.93□□□□□ -0.18
SHC1P29353 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
SHC1P29353 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SHC1P29353 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHC1P29353 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 AC134915.1-201ENST00000426461 574 ntBASIC13.92□□□□□ -0.18
SHC1P29353 AL442647.2-201ENST00000429864 857 ntBASIC13.92□□□□□ -0.18
SHC1P29353 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.92□□□□□ -0.18
SHC1P29353 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.92□□□□□ -0.18
SHC1P29353 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
SHC1P29353 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.92□□□□□ -0.18
SHC1P29353 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHC1P29353 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHC1P29353 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SHC1P29353 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
SHC1P29353 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SHC1P29353 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 C1QBPP1-201ENST00000400117 770 ntBASIC13.91□□□□□ -0.18
SHC1P29353 RPL5P21-201ENST00000404620 815 ntBASIC13.91□□□□□ -0.18
SHC1P29353 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHC1P29353 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.91□□□□□ -0.18
SHC1P29353 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.91□□□□□ -0.18
SHC1P29353 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.91□□□□□ -0.18
SHC1P29353 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms