Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP24386 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP24386 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CHMP24386 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.22□□□□□ -0.13
CHMP24386 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHMP24386 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.22□□□□□ -0.13
CHMP24386 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 BX640514.1-201ENST00000583223 1918 ntBASIC14.21□□□□□ -0.13
CHMP24386 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 OR2I1P-209ENST00000641730 5365 ntBASIC14.21□□□□□ -0.13
CHMP24386 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CHMP24386 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.21□□□□□ -0.13
CHMP24386 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHMP24386 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHMP24386 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.21□□□□□ -0.13
CHMP24386 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.21□□□□□ -0.13
CHMP24386 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.21□□□□□ -0.13
CHMP24386 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.21□□□□□ -0.13
CHMP24386 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.21□□□□□ -0.13
CHMP24386 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.21□□□□□ -0.13
CHMP24386 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.21□□□□□ -0.13
CHMP24386 AC093726.1-201ENST00000608064 963 ntBASIC14.21□□□□□ -0.13
CHMP24386 AL391069.4-201ENST00000609583 481 ntBASIC14.21□□□□□ -0.13
CHMP24386 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CHMP24386 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.21□□□□□ -0.13
CHMP24386 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.21□□□□□ -0.13
CHMP24386 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CHMP24386 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.21□□□□□ -0.13
CHMP24386 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CHMP24386 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
CHMP24386 AL122018.1-201ENST00000446607 2310 ntBASIC14.21□□□□□ -0.13
CHMP24386 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHMP24386 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.21□□□□□ -0.13
CHMP24386 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
CHMP24386 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHMP24386 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.21□□□□□ -0.14
CHMP24386 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.21□□□□□ -0.14
CHMP24386 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHMP24386 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CHMP24386 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CHMP24386 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHMP24386 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
CHMP24386 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.21□□□□□ -0.14
CHMP24386 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHMP24386 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
CHMP24386 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CHMP24386 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHMP24386 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 AC005034.1-201ENST00000426657 489 ntBASIC14.2□□□□□ -0.14
CHMP24386 GAPDHP21-201ENST00000450301 1010 ntBASIC14.2□□□□□ -0.14
CHMP24386 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 RN7SL692P-201ENST00000464677 288 ntBASIC14.2□□□□□ -0.14
CHMP24386 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.2□□□□□ -0.14
CHMP24386 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.2□□□□□ -0.14
CHMP24386 AC036164.1-201ENST00000570544 333 ntBASIC14.2□□□□□ -0.14
CHMP24386 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 CU639417.3-201ENST00000624240 1404 ntBASIC14.2□□□□□ -0.14
CHMP24386 MTHFR-210ENST00000641407 2387 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 1558.8 ms