Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LINC00265-3P-201ENST00000447588 903 ntBASIC11.69□□□□□ -0.54
RAB4AP20338 TSSC2-201ENST00000450217 709 ntBASIC11.69□□□□□ -0.54
RAB4AP20338 AC245100.5-201ENST00000452108 331 ntBASIC11.69□□□□□ -0.54
RAB4AP20338 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.69□□□□□ -0.54
RAB4AP20338 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RAB4AP20338 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.69□□□□□ -0.54
RAB4AP20338 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.69□□□□□ -0.54
RAB4AP20338 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 AP001269.4-201ENST00000609611 512 ntBASIC11.69□□□□□ -0.54
RAB4AP20338 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 AC004706.3-202ENST00000621574 984 ntBASIC11.69□□□□□ -0.54
RAB4AP20338 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB4AP20338 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB4AP20338 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RAB4AP20338 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC11.69□□□□□ -0.54
RAB4AP20338 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
RAB4AP20338 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
RAB4AP20338 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB4AP20338 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB4AP20338 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB4AP20338 AL591684.3-201ENST00000605187 298 ntBASIC11.68□□□□□ -0.54
RAB4AP20338 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 AC010336.1-201ENST00000539278 4739 ntBASIC11.68□□□□□ -0.54
RAB4AP20338 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.68□□□□□ -0.54
RAB4AP20338 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
RAB4AP20338 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB4AP20338 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
RAB4AP20338 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms