Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 FAM185BP-201ENST00000443595 716 ntBASIC12.73□□□□□ -0.37
CXCL3P19876 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CXCL3P19876 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.73□□□□□ -0.37
CXCL3P19876 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.73□□□□□ -0.37
CXCL3P19876 AL031432.2-201ENST00000566714 459 ntBASIC12.73□□□□□ -0.37
CXCL3P19876 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.73□□□□□ -0.37
CXCL3P19876 AL928711.1-201ENST00000570165 459 ntBASIC12.73□□□□□ -0.37
CXCL3P19876 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.73□□□□□ -0.37
CXCL3P19876 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.73□□□□□ -0.37
CXCL3P19876 AL445228.2-201ENST00000605589 952 ntBASIC12.73□□□□□ -0.37
CXCL3P19876 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.73□□□□□ -0.37
CXCL3P19876 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.73□□□□□ -0.37
CXCL3P19876 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.73□□□□□ -0.37
CXCL3P19876 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 AGAP10P-201ENST00000454844 2418 ntBASIC12.73□□□□□ -0.37
CXCL3P19876 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
CXCL3P19876 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CXCL3P19876 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.73□□□□□ -0.37
CXCL3P19876 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 AC072061.1-201ENST00000569710 2234 ntBASIC12.73□□□□□ -0.37
CXCL3P19876 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.73□□□□□ -0.37
CXCL3P19876 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CXCL3P19876 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.73□□□□□ -0.37
CXCL3P19876 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
CXCL3P19876 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CXCL3P19876 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CXCL3P19876 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CXCL3P19876 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CXCL3P19876 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.72□□□□□ -0.37
CXCL3P19876 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.72□□□□□ -0.37
CXCL3P19876 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.72□□□□□ -0.37
CXCL3P19876 PRYP6-201ENST00000514804 343 ntBASIC12.72□□□□□ -0.37
CXCL3P19876 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.72□□□□□ -0.37
CXCL3P19876 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.72□□□□□ -0.37
CXCL3P19876 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 OR7E47P-204ENST00000575924 449 ntBASIC12.72□□□□□ -0.37
CXCL3P19876 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 AL732292.2-201ENST00000609649 430 ntBASIC12.72□□□□□ -0.37
CXCL3P19876 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.72□□□□□ -0.37
CXCL3P19876 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.72□□□□□ -0.37
CXCL3P19876 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.72□□□□□ -0.37
CXCL3P19876 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CXCL3P19876 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CXCL3P19876 AC106818.1-201ENST00000623223 3242 ntBASIC12.71□□□□□ -0.37
CXCL3P19876 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CXCL3P19876 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.71□□□□□ -0.37
CXCL3P19876 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.71□□□□□ -0.37
CXCL3P19876 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CXCL3P19876 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CXCL3P19876 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.71□□□□□ -0.37
CXCL3P19876 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CXCL3P19876 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CXCL3P19876 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CXCL3P19876 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms