Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.34□□□□□ -0.27
ATF1P18846 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.34□□□□□ -0.27
ATF1P18846 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 KRT18P64-201ENST00000434946 1219 ntBASIC13.34□□□□□ -0.27
ATF1P18846 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 AL512356.2-201ENST00000546955 174 ntBASIC13.34□□□□□ -0.27
ATF1P18846 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ATF1P18846 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.34□□□□□ -0.27
ATF1P18846 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ATF1P18846 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATF1P18846 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.34□□□□□ -0.27
ATF1P18846 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATF1P18846 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATF1P18846 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.33□□□□□ -0.27
ATF1P18846 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.33□□□□□ -0.27
ATF1P18846 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATF1P18846 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
ATF1P18846 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 RPL37AP1-201ENST00000412502 279 ntBASIC13.33□□□□□ -0.28
ATF1P18846 AC254562.1-201ENST00000417586 456 ntBASIC13.33□□□□□ -0.28
ATF1P18846 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.33□□□□□ -0.28
ATF1P18846 AC015922.1-201ENST00000421102 1152 ntBASIC13.33□□□□□ -0.28
ATF1P18846 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.33□□□□□ -0.28
ATF1P18846 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.33□□□□□ -0.28
ATF1P18846 TPT1P11-201ENST00000458482 498 ntBASIC13.33□□□□□ -0.28
ATF1P18846 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 AC069262.1-201ENST00000539058 672 ntBASIC13.33□□□□□ -0.28
ATF1P18846 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.33□□□□□ -0.28
ATF1P18846 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.33□□□□□ -0.28
ATF1P18846 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.33□□□□□ -0.28
ATF1P18846 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 AF228730.6-201ENST00000641497 218 ntBASIC13.33□□□□□ -0.28
ATF1P18846 AC084121.3-201ENST00000641716 218 ntBASIC13.33□□□□□ -0.28
ATF1P18846 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ATF1P18846 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
ATF1P18846 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ATF1P18846 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.33□□□□□ -0.28
ATF1P18846 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms