Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HLA-DOBP13765 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 PCDHA3-202ENST00000532566 4594 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 RNU1-114P-201ENST00000365297 166 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AL645937.2-201ENST00000396808 931 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 TP53TG3HP-202ENST00000569755 579 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 PRSS30P-206ENST00000641773 873 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AC099063.4-201ENST00000641099 1602 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 OR2I1P-209ENST00000641730 5365 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 AC139749.1-202ENST00000617529 3139 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 INTS4P1-203ENST00000641008 3683 ntBASIC13.59□□□□□ -0.23
HLA-DOBP13765 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HLA-DOBP13765 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.59□□□□□ -0.23
HLA-DOBP13765 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
HLA-DOBP13765 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HLA-DOBP13765 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.58□□□□□ -0.23
HLA-DOBP13765 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
HLA-DOBP13765 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HLA-DOBP13765 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
HLA-DOBP13765 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HLA-DOBP13765 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AL139094.1-201ENST00000405549 1188 ntBASIC13.58□□□□□ -0.24
HLA-DOBP13765 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AC092364.2-202ENST00000597012 1073 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms