Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL4P13236 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL4P13236 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL4P13236 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CCL4P13236 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL4P13236 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL4P13236 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL4P13236 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCL4P13236 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL4P13236 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL4P13236 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCL4P13236 AC003102.2-201ENST00000589195 1469 ntBASIC14.15□□□□□ -0.14
CCL4P13236 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCL4P13236 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCL4P13236 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 ISCA2P1-201ENST00000425548 448 ntBASIC14.15□□□□□ -0.14
CCL4P13236 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL4P13236 AC012441.2-201ENST00000444843 739 ntBASIC14.15□□□□□ -0.14
CCL4P13236 AC006335.1-201ENST00000445200 547 ntBASIC14.15□□□□□ -0.14
CCL4P13236 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL4P13236 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL4P13236 AC009779.1-201ENST00000551138 283 ntBASIC14.15□□□□□ -0.14
CCL4P13236 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.15□□□□□ -0.14
CCL4P13236 MIR5572-201ENST00000583188 137 ntBASIC14.15□□□□□ -0.14
CCL4P13236 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL4P13236 AC005962.1-201ENST00000584100 773 ntBASIC14.15□□□□□ -0.14
CCL4P13236 AL132994.2-201ENST00000603120 687 ntBASIC14.15□□□□□ -0.14
CCL4P13236 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL4P13236 AL353770.1-201ENST00000614915 403 ntBASIC14.15□□□□□ -0.14
CCL4P13236 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 NAP1L6-202ENST00000641404 1222 ntBASIC14.15□□□□□ -0.14
CCL4P13236 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL4P13236 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCL4P13236 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL4P13236 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL4P13236 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCL4P13236 AC136759.1-202ENST00000530858 2194 ntBASIC14.15□□□□□ -0.15
CCL4P13236 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL4P13236 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 AC023090.2-201ENST00000625182 2110 ntBASIC14.14□□□□□ -0.15
CCL4P13236 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL4P13236 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.14□□□□□ -0.15
CCL4P13236 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.14□□□□□ -0.15
CCL4P13236 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL4P13236 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL4P13236 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 AC234782.1-201ENST00000451950 919 ntBASIC14.14□□□□□ -0.15
CCL4P13236 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CCL4P13236 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 AC090857.1-201ENST00000527400 390 ntBASIC14.14□□□□□ -0.15
CCL4P13236 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL4P13236 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL4P13236 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL4P13236 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.14□□□□□ -0.15
CCL4P13236 AC008825.2-201ENST00000603374 718 ntBASIC14.14□□□□□ -0.15
CCL4P13236 AC012044.1-201ENST00000603431 297 ntBASIC14.14□□□□□ -0.15
CCL4P13236 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 REXO1L2P-201ENST00000425429 2069 ntBASIC14.14□□□□□ -0.15
CCL4P13236 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL4P13236 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL4P13236 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms