Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.66■□□□□ 0.1
CD48P09326 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.66■□□□□ 0.1
CD48P09326 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CD48P09326 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.66■□□□□ 0.1
CD48P09326 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.66■□□□□ 0.1
CD48P09326 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.66■□□□□ 0.1
CD48P09326 AC114812.1-204ENST00000449669 728 ntBASIC15.66■□□□□ 0.1
CD48P09326 TERF1P3-201ENST00000505638 1227 ntBASIC15.66■□□□□ 0.1
CD48P09326 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.66■□□□□ 0.1
CD48P09326 TP53TG3HP-202ENST00000569755 579 ntBASIC15.66■□□□□ 0.1
CD48P09326 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.66■□□□□ 0.1
CD48P09326 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.66■□□□□ 0.1
CD48P09326 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 AC004466.1-201ENST00000599515 1080 ntBASIC15.66■□□□□ 0.1
CD48P09326 RPSAP52-203ENST00000622976 1023 ntBASIC15.66■□□□□ 0.1
CD48P09326 CU634019.7-201ENST00000624153 1185 ntBASIC15.66■□□□□ 0.1
CD48P09326 FP236241.2-201ENST00000624906 1185 ntBASIC15.66■□□□□ 0.1
CD48P09326 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CD48P09326 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 BX640514.1-201ENST00000583223 1918 ntBASIC15.66■□□□□ 0.1
CD48P09326 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.66■□□□□ 0.1
CD48P09326 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CD48P09326 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CD48P09326 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CD48P09326 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD48P09326 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.65■□□□□ 0.1
CD48P09326 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.65■□□□□ 0.1
CD48P09326 AC022616.1-201ENST00000518688 554 ntBASIC15.65■□□□□ 0.1
CD48P09326 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.65■□□□□ 0.1
CD48P09326 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.65■□□□□ 0.1
CD48P09326 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.65■□□□□ 0.1
CD48P09326 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.65■□□□□ 0.1
CD48P09326 AP005019.2-201ENST00000615104 511 ntBASIC15.65■□□□□ 0.1
CD48P09326 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.65■□□□□ 0.1
CD48P09326 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.65■□□□□ 0.1
CD48P09326 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.65■□□□□ 0.1
CD48P09326 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD48P09326 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD48P09326 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms