Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC068587.8-201ENST00000641239 219 ntBASIC14.62□□□□□ -0.07
HOXC4P09017 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.62□□□□□ -0.07
HOXC4P09017 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 MRPL37P1-201ENST00000592451 1337 ntBASIC14.62□□□□□ -0.07
HOXC4P09017 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HOXC4P09017 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.62□□□□□ -0.07
HOXC4P09017 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC4P09017 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC4P09017 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC4P09017 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
HOXC4P09017 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.61□□□□□ -0.07
HOXC4P09017 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 FNTAP2-201ENST00000430308 634 ntBASIC14.61□□□□□ -0.07
HOXC4P09017 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.61□□□□□ -0.07
HOXC4P09017 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.61□□□□□ -0.07
HOXC4P09017 RNMTL1P1-201ENST00000454103 560 ntBASIC14.61□□□□□ -0.07
HOXC4P09017 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.61□□□□□ -0.07
HOXC4P09017 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.61□□□□□ -0.07
HOXC4P09017 AC009884.2-201ENST00000603110 324 ntBASIC14.61□□□□□ -0.07
HOXC4P09017 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 AL136295.7-201ENST00000619226 1200 ntBASIC14.61□□□□□ -0.07
HOXC4P09017 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HOXC4P09017 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HOXC4P09017 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC4P09017 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HOXC4P09017 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HOXC4P09017 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HOXC4P09017 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC4P09017 AC004899.1-201ENST00000424687 1714 ntBASIC14.61□□□□□ -0.07
HOXC4P09017 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.6□□□□□ -0.07
HOXC4P09017 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HOXC4P09017 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.6□□□□□ -0.07
HOXC4P09017 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.6□□□□□ -0.07
HOXC4P09017 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 AC013268.4-201ENST00000637413 2228 ntBASIC14.6□□□□□ -0.07
HOXC4P09017 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HOXC4P09017 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.6□□□□□ -0.07
HOXC4P09017 EIF4HP1-201ENST00000453115 687 ntBASIC14.6□□□□□ -0.07
HOXC4P09017 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HOXC4P09017 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.6□□□□□ -0.07
HOXC4P09017 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.6□□□□□ -0.07
HOXC4P09017 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.6□□□□□ -0.07
HOXC4P09017 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.6□□□□□ -0.07
HOXC4P09017 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.6□□□□□ -0.07
HOXC4P09017 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.6□□□□□ -0.07
HOXC4P09017 AC100757.4-201ENST00000626934 759 ntBASIC14.6□□□□□ -0.07
HOXC4P09017 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HOXC4P09017 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 AC244394.1-201ENST00000435000 1665 ntBASIC14.6□□□□□ -0.07
HOXC4P09017 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC4P09017 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.6□□□□□ -0.07
HOXC4P09017 AGAP7P-201ENST00000582299 2062 ntBASIC14.6□□□□□ -0.07
HOXC4P09017 AGAP14-201ENST00000624701 2060 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms