Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.26□□□□□ -0.29
SFTPBP07988 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
SFTPBP07988 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 MROH4P-201ENST00000431302 1578 ntBASIC13.25□□□□□ -0.29
SFTPBP07988 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.25□□□□□ -0.29
SFTPBP07988 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SFTPBP07988 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SFTPBP07988 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.25□□□□□ -0.29
SFTPBP07988 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.25□□□□□ -0.29
SFTPBP07988 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.25□□□□□ -0.29
SFTPBP07988 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.25□□□□□ -0.29
SFTPBP07988 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.25□□□□□ -0.29
SFTPBP07988 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.25□□□□□ -0.29
SFTPBP07988 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.25□□□□□ -0.29
SFTPBP07988 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.25□□□□□ -0.29
SFTPBP07988 RN7SL204P-201ENST00000582831 262 ntBASIC13.25□□□□□ -0.29
SFTPBP07988 MIR6069-201ENST00000620069 79 ntBASIC13.25□□□□□ -0.29
SFTPBP07988 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.25□□□□□ -0.29
SFTPBP07988 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SFTPBP07988 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 DMBT1P1-203ENST00000636837 4628 ntBASIC13.25□□□□□ -0.29
SFTPBP07988 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SFTPBP07988 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.25□□□□□ -0.29
SFTPBP07988 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.25□□□□□ -0.29
SFTPBP07988 ZBED1P1-201ENST00000502364 1930 ntBASIC13.25□□□□□ -0.29
SFTPBP07988 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SFTPBP07988 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SFTPBP07988 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.24□□□□□ -0.29
SFTPBP07988 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
SFTPBP07988 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SFTPBP07988 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SFTPBP07988 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.24□□□□□ -0.29
SFTPBP07988 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SFTPBP07988 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.24□□□□□ -0.29
SFTPBP07988 MRPS18AP1-201ENST00000414458 589 ntBASIC13.24□□□□□ -0.29
SFTPBP07988 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms