Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM2P07951 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM2P07951 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM2P07951 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC17.32■□□□□ 0.36
TPM2P07951 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM2P07951 AP3S2-216ENST00000617003 1561 ntBASIC17.32■□□□□ 0.36
TPM2P07951 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TPM2P07951 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TPM2P07951 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 AC130686.1-201ENST00000622936 2466 ntBASIC17.31■□□□□ 0.36
TPM2P07951 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
TPM2P07951 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 AL353705.2-201ENST00000428243 662 ntBASIC17.31■□□□□ 0.36
TPM2P07951 AL592309.1-201ENST00000443127 649 ntBASIC17.31■□□□□ 0.36
TPM2P07951 FDX1P1-201ENST00000449115 551 ntBASIC17.31■□□□□ 0.36
TPM2P07951 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.31■□□□□ 0.36
TPM2P07951 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.31■□□□□ 0.36
TPM2P07951 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 AC055717.3-201ENST00000622967 595 ntBASIC17.31■□□□□ 0.36
TPM2P07951 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TPM2P07951 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 BEND3P3-201ENST00000611030 2440 ntBASIC17.31■□□□□ 0.36
TPM2P07951 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 AC023024.2-201ENST00000623561 1993 ntBASIC17.31■□□□□ 0.36
TPM2P07951 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TPM2P07951 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 AC113367.3-201ENST00000508316 1912 ntBASIC17.31■□□□□ 0.36
TPM2P07951 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.31■□□□□ 0.36
TPM2P07951 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.31■□□□□ 0.36
TPM2P07951 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.31■□□□□ 0.36
TPM2P07951 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPM2P07951 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 MCCD1P2-201ENST00000423228 335 ntBASIC17.3■□□□□ 0.36
TPM2P07951 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.3■□□□□ 0.36
TPM2P07951 LINC01225-203ENST00000563550 1244 ntBASIC17.3■□□□□ 0.36
TPM2P07951 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.3■□□□□ 0.36
TPM2P07951 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM2P07951 C20orf181-201ENST00000623918 480 ntBASIC17.3■□□□□ 0.36
TPM2P07951 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms