Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSDP07339 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CTSDP07339 CICP17-201ENST00000418553 2377 ntBASIC12.62□□□□□ -0.39
CTSDP07339 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 AC016397.2-201ENST00000624848 1985 ntBASIC12.61□□□□□ -0.39
CTSDP07339 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CTSDP07339 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 TIMM8BP1-201ENST00000452384 211 ntBASIC12.61□□□□□ -0.39
CTSDP07339 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.61□□□□□ -0.39
CTSDP07339 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 KRT18P43-201ENST00000469825 1281 ntBASIC12.61□□□□□ -0.39
CTSDP07339 AC069335.1-201ENST00000489972 472 ntBASIC12.61□□□□□ -0.39
CTSDP07339 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.61□□□□□ -0.39
CTSDP07339 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CTSDP07339 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.61□□□□□ -0.39
CTSDP07339 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 Z97205.2-201ENST00000564697 1639 ntBASIC12.61□□□□□ -0.39
CTSDP07339 AGGF1P1-201ENST00000509500 2073 ntBASIC12.61□□□□□ -0.39
CTSDP07339 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.61□□□□□ -0.39
CTSDP07339 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 AL360270.3-201ENST00000609118 1348 ntBASIC12.61□□□□□ -0.39
CTSDP07339 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.61□□□□□ -0.39
CTSDP07339 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CTSDP07339 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 KRT8P24-201ENST00000560290 1559 ntBASIC12.6□□□□□ -0.39
CTSDP07339 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CTSDP07339 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CTSDP07339 AC023274.1-201ENST00000418278 595 ntBASIC12.6□□□□□ -0.39
CTSDP07339 KRT18P64-201ENST00000434946 1219 ntBASIC12.6□□□□□ -0.39
CTSDP07339 AL592309.1-201ENST00000443127 649 ntBASIC12.6□□□□□ -0.39
CTSDP07339 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.6□□□□□ -0.39
CTSDP07339 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.6□□□□□ -0.39
CTSDP07339 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.6□□□□□ -0.39
CTSDP07339 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.6□□□□□ -0.39
CTSDP07339 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.6□□□□□ -0.39
CTSDP07339 AC074044.1-201ENST00000609673 707 ntBASIC12.6□□□□□ -0.39
CTSDP07339 AC018529.1-201ENST00000613063 361 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms