Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHGBP05060 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHGBP05060 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.09■□□□□ 0.49
CHGBP05060 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.09■□□□□ 0.49
CHGBP05060 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.09■□□□□ 0.49
CHGBP05060 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHGBP05060 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.09■□□□□ 0.49
CHGBP05060 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.09■□□□□ 0.49
CHGBP05060 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHGBP05060 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.09■□□□□ 0.49
CHGBP05060 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.09■□□□□ 0.49
CHGBP05060 AC138696.2-201ENST00000607376 223 ntBASIC18.09■□□□□ 0.49
CHGBP05060 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.09■□□□□ 0.49
CHGBP05060 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
CHGBP05060 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CHGBP05060 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHGBP05060 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 LINC01101-201ENST00000622953 1884 ntBASIC18.09■□□□□ 0.49
CHGBP05060 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHGBP05060 AC006058.4-201ENST00000624016 1670 ntBASIC18.09■□□□□ 0.49
CHGBP05060 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHGBP05060 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHGBP05060 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHGBP05060 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHGBP05060 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHGBP05060 KRT8P4-201ENST00000509735 1454 ntBASIC18.08■□□□□ 0.49
CHGBP05060 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHGBP05060 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHGBP05060 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.08■□□□□ 0.49
CHGBP05060 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.08■□□□□ 0.49
CHGBP05060 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHGBP05060 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHGBP05060 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHGBP05060 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHGBP05060 AL138725.1-201ENST00000407347 1314 ntBASIC18.08■□□□□ 0.49
CHGBP05060 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CHGBP05060 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.08■□□□□ 0.48
CHGBP05060 FAM8A4P-201ENST00000435433 1213 ntBASIC18.08■□□□□ 0.48
CHGBP05060 CNN2P10-201ENST00000443067 918 ntBASIC18.08■□□□□ 0.48
CHGBP05060 RPL13AP20-201ENST00000459725 609 ntBASIC18.08■□□□□ 0.48
CHGBP05060 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.08■□□□□ 0.48
CHGBP05060 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.08■□□□□ 0.48
CHGBP05060 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.08■□□□□ 0.48
CHGBP05060 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CHGBP05060 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.08■□□□□ 0.48
CHGBP05060 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.08■□□□□ 0.48
CHGBP05060 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.08■□□□□ 0.48
CHGBP05060 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.08■□□□□ 0.48
CHGBP05060 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.08■□□□□ 0.48
CHGBP05060 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHGBP05060 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.08■□□□□ 0.48
CHGBP05060 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CHGBP05060 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHGBP05060 AC097359.2-201ENST00000604992 2389 ntBASIC18.08■□□□□ 0.48
CHGBP05060 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CHGBP05060 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHGBP05060 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CHGBP05060 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CHGBP05060 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHGBP05060 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.07■□□□□ 0.48
CHGBP05060 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.07■□□□□ 0.48
CHGBP05060 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHGBP05060 MIR1908-201ENST00000410394 80 ntBASIC18.07■□□□□ 0.48
CHGBP05060 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.07■□□□□ 0.48
CHGBP05060 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.07■□□□□ 0.48
CHGBP05060 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.07■□□□□ 0.48
CHGBP05060 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms