Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
APOBP04114 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
APOBP04114 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
APOBP04114 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC9.09□□□□□ -0.95
APOBP04114 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC9.09□□□□□ -0.95
APOBP04114 KRT8P18-201ENST00000413425 1445 ntBASIC9.09□□□□□ -0.95
APOBP04114 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 AC112693.3-201ENST00000624819 1983 ntBASIC9.09□□□□□ -0.95
APOBP04114 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC9.09□□□□□ -0.95
APOBP04114 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 AC092862.1-201ENST00000541534 533 ntBASIC9.09□□□□□ -0.95
APOBP04114 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC9.09□□□□□ -0.95
APOBP04114 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 BRD7P5-201ENST00000299197 1822 ntBASIC9.09□□□□□ -0.95
APOBP04114 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 PCDHA14-201ENST00000506751 2298 ntBASIC9.09□□□□□ -0.95
APOBP04114 KHSRPP1-201ENST00000427983 1768 ntBASIC9.09□□□□□ -0.95
APOBP04114 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 AC098934.1-203ENST00000442868 1262 ntBASIC9.09□□□□□ -0.95
APOBP04114 FAM86B3P-203ENST00000523992 854 ntBASIC9.09□□□□□ -0.95
APOBP04114 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC9.09□□□□□ -0.95
APOBP04114 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC9.09□□□□□ -0.95
APOBP04114 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC9.09□□□□□ -0.95
APOBP04114 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
APOBP04114 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.09□□□□□ -0.95
APOBP04114 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC9.09□□□□□ -0.95
APOBP04114 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.09□□□□□ -0.95
APOBP04114 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC9.09□□□□□ -0.95
APOBP04114 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.09□□□□□ -0.95
APOBP04114 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
APOBP04114 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
APOBP04114 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC9.09□□□□□ -0.96
APOBP04114 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC9.09□□□□□ -0.96
APOBP04114 IGHEP1-201ENST00000521393 651 ntBASIC9.09□□□□□ -0.96
APOBP04114 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC9.09□□□□□ -0.96
APOBP04114 AC226150.1-201ENST00000544259 466 ntBASIC9.09□□□□□ -0.96
APOBP04114 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC9.09□□□□□ -0.96
APOBP04114 WARS-232ENST00000556645 2508 ntTSL 5 BASIC9.09□□□□□ -0.96
APOBP04114 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 AC012508.2-201ENST00000567613 1472 ntBASIC9.08□□□□□ -0.96
APOBP04114 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 IGHVIII-5-2-201ENST00000522505 261 ntBASIC9.08□□□□□ -0.96
APOBP04114 VENTXP3-201ENST00000546480 773 ntBASIC9.08□□□□□ -0.96
APOBP04114 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC9.08□□□□□ -0.96
APOBP04114 MIR4746-201ENST00000579802 71 ntBASIC9.08□□□□□ -0.96
APOBP04114 SALL4P5-201ENST00000419001 1760 ntBASIC9.08□□□□□ -0.96
APOBP04114 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC9.08□□□□□ -0.96
APOBP04114 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
APOBP04114 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC9.08□□□□□ -0.96
APOBP04114 AF274858.1-201ENST00000406288 372 ntBASIC9.08□□□□□ -0.96
APOBP04114 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC9.08□□□□□ -0.96
APOBP04114 AC006328.1-201ENST00000437571 379 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms