Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 AL138799.1-201ENST00000448213 1675 ntBASIC12.22□□□□□ -0.45
HLA-DRB1P01911 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB1P01911 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB1P01911 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB1P01911 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB1P01911 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB1P01911 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AL645937.2-201ENST00000396808 931 ntBASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 NUS1P3-201ENST00000423502 862 ntBASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AL162726.2-201ENST00000438986 1017 ntBASIC12.21□□□□□ -0.45
HLA-DRB1P01911 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB1P01911 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
HLA-DRB1P01911 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 KRT8P22-201ENST00000562317 1415 ntBASIC12.2□□□□□ -0.46
HLA-DRB1P01911 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.2□□□□□ -0.46
HLA-DRB1P01911 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 AL122018.1-201ENST00000446607 2310 ntBASIC12.2□□□□□ -0.46
HLA-DRB1P01911 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 AC093525.8-201ENST00000624099 1342 ntBASIC12.2□□□□□ -0.46
HLA-DRB1P01911 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 ENPP7P5-201ENST00000541031 1031 ntBASIC12.2□□□□□ -0.46
HLA-DRB1P01911 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB1P01911 AL359711.2-201ENST00000563105 872 ntBASIC12.2□□□□□ -0.46
HLA-DRB1P01911 WASH4P-201ENST00000564273 1246 ntBASIC12.2□□□□□ -0.46
HLA-DRB1P01911 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms