Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.92■□□□□ 0.3
GGPS1O95749 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.92■□□□□ 0.3
GGPS1O95749 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 SCARNA20.5-201ENST00000516991 142 ntBASIC16.92■□□□□ 0.3
GGPS1O95749 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.92■□□□□ 0.3
GGPS1O95749 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.92■□□□□ 0.3
GGPS1O95749 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.92■□□□□ 0.3
GGPS1O95749 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.92■□□□□ 0.3
GGPS1O95749 AC020914.3-201ENST00000594712 304 ntBASIC16.92■□□□□ 0.3
GGPS1O95749 AL451050.2-201ENST00000606967 682 ntBASIC16.92■□□□□ 0.3
GGPS1O95749 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.92■□□□□ 0.3
GGPS1O95749 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.92■□□□□ 0.3
GGPS1O95749 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GGPS1O95749 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GGPS1O95749 INE2-201ENST00000630399 1874 ntBASIC16.92■□□□□ 0.3
GGPS1O95749 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
GGPS1O95749 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GGPS1O95749 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.92■□□□□ 0.3
GGPS1O95749 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GGPS1O95749 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
GGPS1O95749 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
GGPS1O95749 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
GGPS1O95749 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 RN7SKP175-201ENST00000408472 289 ntBASIC16.91■□□□□ 0.3
GGPS1O95749 AL354877.1-201ENST00000424412 413 ntBASIC16.91■□□□□ 0.3
GGPS1O95749 FNTAP2-201ENST00000430308 634 ntBASIC16.91■□□□□ 0.3
GGPS1O95749 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.91■□□□□ 0.3
GGPS1O95749 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.91■□□□□ 0.3
GGPS1O95749 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.91■□□□□ 0.3
GGPS1O95749 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 DBET-201ENST00000630918 3363 ntBASIC16.91■□□□□ 0.3
GGPS1O95749 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GGPS1O95749 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 AP000845.1-201ENST00000581677 2131 ntBASIC16.91■□□□□ 0.3
GGPS1O95749 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.91■□□□□ 0.3
GGPS1O95749 AC138028.6-201ENST00000616106 1482 ntBASIC16.91■□□□□ 0.3
GGPS1O95749 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 AC023024.2-201ENST00000623561 1993 ntBASIC16.91■□□□□ 0.3
GGPS1O95749 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GGPS1O95749 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
GGPS1O95749 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GGPS1O95749 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
GGPS1O95749 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 AC006486.2-201ENST00000624246 2199 ntBASIC16.9■□□□□ 0.3
GGPS1O95749 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GGPS1O95749 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.9■□□□□ 0.3
GGPS1O95749 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.9■□□□□ 0.3
GGPS1O95749 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GGPS1O95749 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.9■□□□□ 0.3
GGPS1O95749 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.9■□□□□ 0.3
GGPS1O95749 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.9■□□□□ 0.3
GGPS1O95749 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GGPS1O95749 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.9■□□□□ 0.3
GGPS1O95749 ACTG1P17-201ENST00000558391 1119 ntBASIC16.9■□□□□ 0.3
GGPS1O95749 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.9■□□□□ 0.3
GGPS1O95749 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms