Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
ABCA1O95477 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.76□□□□□ -0.37
ABCA1O95477 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.76□□□□□ -0.37
ABCA1O95477 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ABCA1O95477 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.76□□□□□ -0.37
ABCA1O95477 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.76□□□□□ -0.37
ABCA1O95477 SPTLC1P5-201ENST00000450718 252 ntBASIC12.76□□□□□ -0.37
ABCA1O95477 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.76□□□□□ -0.37
ABCA1O95477 AC044849.1-201ENST00000519737 1188 ntBASIC12.76□□□□□ -0.37
ABCA1O95477 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.76□□□□□ -0.37
ABCA1O95477 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.76□□□□□ -0.37
ABCA1O95477 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ABCA1O95477 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.75□□□□□ -0.37
ABCA1O95477 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.75□□□□□ -0.37
ABCA1O95477 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
ABCA1O95477 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.75□□□□□ -0.37
ABCA1O95477 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ABCA1O95477 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ABCA1O95477 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 AC016700.1-201ENST00000429424 312 ntBASIC12.75□□□□□ -0.37
ABCA1O95477 MAGEA5-201ENST00000446757 942 ntBASIC12.75□□□□□ -0.37
ABCA1O95477 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.75□□□□□ -0.37
ABCA1O95477 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 MIR5572-201ENST00000583188 137 ntBASIC12.75□□□□□ -0.37
ABCA1O95477 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.75□□□□□ -0.37
ABCA1O95477 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.75□□□□□ -0.37
ABCA1O95477 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.75□□□□□ -0.37
ABCA1O95477 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.75□□□□□ -0.37
ABCA1O95477 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ABCA1O95477 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
ABCA1O95477 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ABCA1O95477 AC091046.1-201ENST00000331871 207 ntBASIC12.74□□□□□ -0.37
ABCA1O95477 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.74□□□□□ -0.37
ABCA1O95477 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ABCA1O95477 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.74□□□□□ -0.37
ABCA1O95477 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.74□□□□□ -0.37
ABCA1O95477 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.74□□□□□ -0.37
ABCA1O95477 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ABCA1O95477 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ABCA1O95477 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ABCA1O95477 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ABCA1O95477 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ABCA1O95477 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ABCA1O95477 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms