Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD4O95243 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.98■□□□□ 0.47
MBD4O95243 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MBD4O95243 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.98■□□□□ 0.47
MBD4O95243 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
MBD4O95243 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.97■□□□□ 0.47
MBD4O95243 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 BRWD1P1-201ENST00000401091 371 ntBASIC17.97■□□□□ 0.47
MBD4O95243 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.97■□□□□ 0.47
MBD4O95243 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.97■□□□□ 0.47
MBD4O95243 HIST2H2BB-201ENST00000449108 381 ntBASIC17.97■□□□□ 0.47
MBD4O95243 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.97■□□□□ 0.47
MBD4O95243 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.97■□□□□ 0.47
MBD4O95243 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.97■□□□□ 0.47
MBD4O95243 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.97■□□□□ 0.47
MBD4O95243 ZACNP1-201ENST00000612259 710 ntBASIC17.97■□□□□ 0.47
MBD4O95243 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
MBD4O95243 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
MBD4O95243 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.97■□□□□ 0.47
MBD4O95243 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 DBET-201ENST00000630918 3363 ntBASIC17.97■□□□□ 0.47
MBD4O95243 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD4O95243 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD4O95243 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
MBD4O95243 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD4O95243 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD4O95243 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.96■□□□□ 0.47
MBD4O95243 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MBD4O95243 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.96■□□□□ 0.47
MBD4O95243 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 CHMP1AP1-201ENST00000445563 662 ntBASIC17.96■□□□□ 0.47
MBD4O95243 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.96■□□□□ 0.47
MBD4O95243 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD4O95243 RN7SL219P-201ENST00000582872 296 ntBASIC17.96■□□□□ 0.47
MBD4O95243 MIR6799-201ENST00000620297 69 ntBASIC17.96■□□□□ 0.47
MBD4O95243 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.96■□□□□ 0.47
MBD4O95243 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MBD4O95243 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MBD4O95243 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MBD4O95243 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD4O95243 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD4O95243 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
MBD4O95243 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.96■□□□□ 0.46
MBD4O95243 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.96■□□□□ 0.46
MBD4O95243 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 AJ011931.1-201ENST00000618749 2492 ntBASIC17.95■□□□□ 0.46
MBD4O95243 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
MBD4O95243 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 AC007969.1-201ENST00000433675 447 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms