Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CDRT1O95170 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDRT1O95170 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.57□□□□□ -0.24
CDRT1O95170 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDRT1O95170 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CDRT1O95170 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 PEG13-201ENST00000631594 5667 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CDRT1O95170 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDRT1O95170 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.57□□□□□ -0.24
CDRT1O95170 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.57□□□□□ -0.24
CDRT1O95170 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 AL590627.1-203ENST00000421194 1026 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 MED15P5-201ENST00000423150 992 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 KRT18P3-201ENST00000451602 1288 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 SLC25A1P1-201ENST00000528351 927 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.57□□□□□ -0.24
CDRT1O95170 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 AC140113.2-201ENST00000604370 208 ntBASIC13.57□□□□□ -0.24
CDRT1O95170 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.57□□□□□ -0.24
CDRT1O95170 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CDRT1O95170 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDRT1O95170 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.57□□□□□ -0.24
CDRT1O95170 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDRT1O95170 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDRT1O95170 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDRT1O95170 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 AC012508.2-201ENST00000567613 1472 ntBASIC13.56□□□□□ -0.24
CDRT1O95170 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.56□□□□□ -0.24
CDRT1O95170 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CDRT1O95170 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.56□□□□□ -0.24
CDRT1O95170 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 FAM58CP-201ENST00000435741 640 ntBASIC13.56□□□□□ -0.24
CDRT1O95170 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDRT1O95170 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.56□□□□□ -0.24
CDRT1O95170 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.56□□□□□ -0.24
CDRT1O95170 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDRT1O95170 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.56□□□□□ -0.24
CDRT1O95170 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.56□□□□□ -0.24
CDRT1O95170 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.56□□□□□ -0.24
CDRT1O95170 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms