Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
OPHN1O60890 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.9■□□□□ 0.14
OPHN1O60890 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.9■□□□□ 0.14
OPHN1O60890 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.9■□□□□ 0.14
OPHN1O60890 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
OPHN1O60890 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
OPHN1O60890 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
OPHN1O60890 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.89■□□□□ 0.13
OPHN1O60890 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.89■□□□□ 0.13
OPHN1O60890 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 WASH3P-207ENST00000560956 1394 ntBASIC15.89■□□□□ 0.13
OPHN1O60890 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
OPHN1O60890 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.89■□□□□ 0.13
OPHN1O60890 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 GHSR-202ENST00000427970 912 ntBASIC15.89■□□□□ 0.13
OPHN1O60890 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.89■□□□□ 0.13
OPHN1O60890 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.89■□□□□ 0.13
OPHN1O60890 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 RN7SL219P-201ENST00000582872 296 ntBASIC15.89■□□□□ 0.13
OPHN1O60890 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.89■□□□□ 0.13
OPHN1O60890 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 ZBED1P1-201ENST00000502364 1930 ntBASIC15.89■□□□□ 0.13
OPHN1O60890 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.89■□□□□ 0.13
OPHN1O60890 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
OPHN1O60890 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.89■□□□□ 0.13
OPHN1O60890 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 CICP11-201ENST00000434745 2827 ntBASIC15.89■□□□□ 0.13
OPHN1O60890 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPHN1O60890 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.88■□□□□ 0.13
OPHN1O60890 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.88■□□□□ 0.13
OPHN1O60890 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 BNIP3P42-201ENST00000454982 569 ntBASIC15.88■□□□□ 0.13
OPHN1O60890 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.88■□□□□ 0.13
OPHN1O60890 BNIP3P29-201ENST00000598302 571 ntBASIC15.88■□□□□ 0.13
OPHN1O60890 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.88■□□□□ 0.13
OPHN1O60890 MIR8072-201ENST00000614241 80 ntBASIC15.88■□□□□ 0.13
OPHN1O60890 AC011447.5-201ENST00000616168 564 ntBASIC15.88■□□□□ 0.13
OPHN1O60890 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.88■□□□□ 0.13
OPHN1O60890 AC023908.3-201ENST00000564211 3047 ntBASIC15.88■□□□□ 0.13
OPHN1O60890 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 AL121723.1-201ENST00000445194 1519 ntBASIC15.88■□□□□ 0.13
OPHN1O60890 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.88■□□□□ 0.13
OPHN1O60890 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
OPHN1O60890 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPHN1O60890 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms