Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.22■□□□□ 0.03
SMAD6O43541 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 CHMP1AP1-201ENST00000445563 662 ntBASIC15.22■□□□□ 0.03
SMAD6O43541 Z93015.1-201ENST00000451718 390 ntBASIC15.22■□□□□ 0.03
SMAD6O43541 AC108725.1-201ENST00000495472 409 ntBASIC15.22■□□□□ 0.03
SMAD6O43541 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.22■□□□□ 0.03
SMAD6O43541 EEF1DP1-201ENST00000585891 896 ntBASIC15.22■□□□□ 0.03
SMAD6O43541 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.22■□□□□ 0.03
SMAD6O43541 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SMAD6O43541 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 AC003102.2-201ENST00000589195 1469 ntBASIC15.21■□□□□ 0.03
SMAD6O43541 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 CICP23-201ENST00000605013 2741 ntBASIC15.21■□□□□ 0.03
SMAD6O43541 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.21■□□□□ 0.03
SMAD6O43541 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 RN7SKP175-201ENST00000408472 289 ntBASIC15.21■□□□□ 0.03
SMAD6O43541 HIST2H2BB-201ENST00000449108 381 ntBASIC15.21■□□□□ 0.03
SMAD6O43541 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 RPSAP36-202ENST00000494591 1261 ntBASIC15.21■□□□□ 0.03
SMAD6O43541 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.21■□□□□ 0.03
SMAD6O43541 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SMAD6O43541 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
SMAD6O43541 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.21■□□□□ 0.03
SMAD6O43541 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.21■□□□□ 0.03
SMAD6O43541 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.21■□□□□ 0.03
SMAD6O43541 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.21■□□□□ 0.03
SMAD6O43541 ZACNP1-201ENST00000612259 710 ntBASIC15.21■□□□□ 0.03
SMAD6O43541 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.21■□□□□ 0.03
SMAD6O43541 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SMAD6O43541 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.21■□□□□ 0.03
SMAD6O43541 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.21■□□□□ 0.03
SMAD6O43541 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMAD6O43541 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
SMAD6O43541 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMAD6O43541 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SMAD6O43541 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SMAD6O43541 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMAD6O43541 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SMAD6O43541 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMAD6O43541 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMAD6O43541 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SMAD6O43541 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
SMAD6O43541 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SMAD6O43541 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.2■□□□□ 0.02
SMAD6O43541 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SMAD6O43541 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms