Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ALG1L5P-201ENST00000482043 771 ntBASIC15.39■□□□□ 0.05
RIPK2O43353 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.39■□□□□ 0.05
RIPK2O43353 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 AC000095.1-201ENST00000603208 874 ntBASIC15.39■□□□□ 0.05
RIPK2O43353 AL589739.1-201ENST00000607720 493 ntBASIC15.39■□□□□ 0.05
RIPK2O43353 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.39■□□□□ 0.05
RIPK2O43353 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RIPK2O43353 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RIPK2O43353 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RIPK2O43353 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
RIPK2O43353 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.38■□□□□ 0.05
RIPK2O43353 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RIPK2O43353 AL137783.1-201ENST00000623494 1896 ntBASIC15.38■□□□□ 0.05
RIPK2O43353 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RIPK2O43353 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.38■□□□□ 0.05
RIPK2O43353 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.38■□□□□ 0.05
RIPK2O43353 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.38■□□□□ 0.05
RIPK2O43353 TMEM198B-204ENST00000484016 896 ntBASIC15.38■□□□□ 0.05
RIPK2O43353 AC004066.1-201ENST00000502488 802 ntBASIC15.38■□□□□ 0.05
RIPK2O43353 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.38■□□□□ 0.05
RIPK2O43353 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.38■□□□□ 0.05
RIPK2O43353 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RIPK2O43353 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.38■□□□□ 0.05
RIPK2O43353 MIR4453-201ENST00000584019 89 ntBASIC15.38■□□□□ 0.05
RIPK2O43353 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.38■□□□□ 0.05
RIPK2O43353 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RIPK2O43353 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
RIPK2O43353 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.38■□□□□ 0.05
RIPK2O43353 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 AC067750.1-201ENST00000608826 6545 ntBASIC15.38■□□□□ 0.05
RIPK2O43353 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RIPK2O43353 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
RIPK2O43353 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 TCAF1P1-201ENST00000414990 2232 ntBASIC15.37■□□□□ 0.05
RIPK2O43353 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RIPK2O43353 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RIPK2O43353 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RIPK2O43353 AL359183.1-201ENST00000623796 2132 ntBASIC15.37■□□□□ 0.05
RIPK2O43353 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RIPK2O43353 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RIPK2O43353 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.37■□□□□ 0.05
RIPK2O43353 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.37■□□□□ 0.05
RIPK2O43353 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.37■□□□□ 0.05
RIPK2O43353 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.37■□□□□ 0.05
RIPK2O43353 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms