Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CHD2O14647 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD2O14647 AC084018.2-201ENST00000613093 2607 ntBASIC20.31■□□□□ 0.84
CHD2O14647 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD2O14647 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 AC092135.3-201ENST00000624151 1846 ntBASIC20.3■□□□□ 0.84
CHD2O14647 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 FUCA1P1-201ENST00000374476 1351 ntBASIC20.3■□□□□ 0.84
CHD2O14647 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD2O14647 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD2O14647 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD2O14647 AL132994.1-201ENST00000554098 400 ntBASIC20.3■□□□□ 0.84
CHD2O14647 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD2O14647 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 F11R-204ENST00000537746 1245 ntTSL 2 BASIC20.3■□□□□ 0.84
CHD2O14647 KLF17P1-201ENST00000547105 1126 ntBASIC20.3■□□□□ 0.84
CHD2O14647 PTPN20CP-201ENST00000614090 920 ntBASIC20.3■□□□□ 0.84
CHD2O14647 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.3■□□□□ 0.84
CHD2O14647 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHD2O14647 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD2O14647 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 AL118508.1-201ENST00000613502 2345 ntBASIC20.29■□□□□ 0.84
CHD2O14647 PCDH8P1-201ENST00000428983 2773 ntBASIC20.29■□□□□ 0.84
CHD2O14647 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD2O14647 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 GEMIN8P4-201ENST00000380526 729 ntBASIC20.29■□□□□ 0.84
CHD2O14647 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD2O14647 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CHD2O14647 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CHD2O14647 AC023024.2-201ENST00000623561 1993 ntBASIC20.29■□□□□ 0.84
CHD2O14647 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD2O14647 AC004554.1-201ENST00000422830 1468 ntBASIC20.29■□□□□ 0.84
CHD2O14647 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD2O14647 FZD10-202ENST00000539839 3282 ntBASIC20.28■□□□□ 0.84
CHD2O14647 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHD2O14647 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 AC092850.2-201ENST00000623821 2697 ntBASIC20.28■□□□□ 0.84
CHD2O14647 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHD2O14647 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 AC004522.1-201ENST00000419978 654 ntBASIC20.28■□□□□ 0.84
CHD2O14647 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD2O14647 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD2O14647 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.28■□□□□ 0.84
CHD2O14647 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD2O14647 MIR5001-201ENST00000580185 100 ntBASIC20.28■□□□□ 0.84
CHD2O14647 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD2O14647 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD2O14647 LINC01101-201ENST00000622953 1884 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms