Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LOC285556D6RIA3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.81■□□□□ 0.28
LOC285556D6RIA3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.81■□□□□ 0.28
LOC285556D6RIA3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LOC285556D6RIA3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LOC285556D6RIA3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 OR8T1P-201ENST00000421347 918 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC004837.1-201ENST00000446267 564 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC127024.7-201ENST00000625101 200 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC138035.3-201ENST00000622706 2791 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 CR383656.3-201ENST00000551315 183 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 MIR3180-2-201ENST00000581748 88 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC090386.2-201ENST00000623010 1039 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 AC009084.3-201ENST00000623356 437 ntBASIC16.79■□□□□ 0.28
LOC285556D6RIA3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LOC285556D6RIA3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LOC285556D6RIA3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LOC285556D6RIA3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LOC285556D6RIA3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LOC285556D6RIA3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms