Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 DRD5P1-201ENST00000456605 1438 ntBASIC16.1■□□□□ 0.17
RCCD1A6NED2 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RCCD1A6NED2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RCCD1A6NED2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 SPDYE18-201ENST00000510091 1050 ntBASIC16.09■□□□□ 0.17
RCCD1A6NED2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 AC006538.3-201ENST00000612495 578 ntBASIC16.09■□□□□ 0.17
RCCD1A6NED2 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.09■□□□□ 0.17
RCCD1A6NED2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RCCD1A6NED2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
RCCD1A6NED2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCCD1A6NED2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
RCCD1A6NED2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RCCD1A6NED2 AC105206.1-202ENST00000314927 2368 ntBASIC16.08■□□□□ 0.17
RCCD1A6NED2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RCCD1A6NED2 AL359881.3-201ENST00000602640 1721 ntBASIC16.08■□□□□ 0.17
RCCD1A6NED2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCCD1A6NED2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.08■□□□□ 0.17
RCCD1A6NED2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RCCD1A6NED2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RCCD1A6NED2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.08■□□□□ 0.16
RCCD1A6NED2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC114501.2-201ENST00000439631 535 ntBASIC16.08■□□□□ 0.16
RCCD1A6NED2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 ZNF890P-202ENST00000530367 1156 ntBASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms