Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MBD3L3A6NE82 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AL008718.2-201ENST00000609206 1313 ntBASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 RPL18P13-201ENST00000478088 569 ntBASIC13.16□□□□□ -0.3
MBD3L3A6NE82 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 RN7SL774P-201ENST00000577467 290 ntBASIC13.16□□□□□ -0.3
MBD3L3A6NE82 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AC009884.2-201ENST00000603110 324 ntBASIC13.16□□□□□ -0.3
MBD3L3A6NE82 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AC027601.3-201ENST00000622907 509 ntBASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MBD3L3A6NE82 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 VDAC1P1-201ENST00000439229 848 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 CICP12-201ENST00000455801 843 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 HLA-J-204ENST00000495278 958 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AC125604.1-201ENST00000496255 707 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 RHOQP1-201ENST00000555758 579 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 SNORD3B-2-202ENST00000571722 791 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AL132994.2-201ENST00000603120 687 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 MIR6720-201ENST00000611664 98 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AP001505.2-201ENST00000616815 443 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms