Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 AC006480.2-201ENST00000609770 1337 ntBASIC14.27□□□□□ -0.12
CCDC187A0A096LP49 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 AC008267.1-201ENST00000474858 1069 ntBASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 AL132994.2-201ENST00000603120 687 ntBASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 TSPY26P-202ENST00000565928 3884 ntBASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 AC010491.1-201ENST00000563101 2797 ntBASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC187A0A096LP49 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 E2F3P2-201ENST00000447755 1422 ntBASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 AL157414.3-201ENST00000624276 1954 ntBASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 AC012441.2-201ENST00000444843 739 ntBASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 SNORD3B-2-202ENST00000571722 791 ntBASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 AF254983.2-201ENST00000612331 135 ntBASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms