Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1G3Q9Y6M4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1G3Q9Y6M4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AL136309.1-201ENST00000403917 691 ntBASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SLC25A24P2-201ENST00000415059 510 ntBASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 HLA-K-203ENST00000430151 1046 ntBASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 MESTP3-201ENST00000503460 968 ntBASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AL391280.1-201ENST00000506969 1062 ntBASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AC138466.3-201ENST00000619983 221 ntBASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AC013268.4-201ENST00000637413 2228 ntBASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1G3Q9Y6M4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 AC055811.4-201ENST00000624039 1754 ntBASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 AC007663.3-201ENST00000609632 465 ntBASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 AC018735.1-201ENST00000437208 1502 ntBASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 FAM45BP-202ENST00000592932 1624 ntBASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1G3Q9Y6M4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1G3Q9Y6M4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms