Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 AC006504.5-208ENST00000588784 2401 ntBASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 AC090386.2-201ENST00000623010 1039 ntBASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDC42BPBQ9Y5S2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 BRD7P5-201ENST00000299197 1822 ntBASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 ACE3P-201ENST00000423435 1973 ntBASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CDC42BPBQ9Y5S2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 PYY2-201ENST00000315776 282 ntBASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 AC084018.2-201ENST00000613093 2607 ntBASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDC42BPBQ9Y5S2 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 Z69890.1-201ENST00000382990 339 ntBASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 AL118516.1-201ENST00000564152 670 ntBASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 FO393412.1-201ENST00000619841 382 ntBASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC00431-202ENST00000636375 159 ntBASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 PGAM1P12-201ENST00000505622 748 ntBASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 AC138466.4-201ENST00000623965 852 ntBASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC00528-201ENST00000600723 2160 ntBASIC22.11■■□□□ 1.13
CDC42BPBQ9Y5S2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms