Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 AC007969.1-201ENST00000433675 447 ntBASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 AL590640.2-201ENST00000457038 527 ntBASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 ENPP7P14-201ENST00000621765 1040 ntBASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 AL008638.5-201ENST00000623814 1298 ntBASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.2
SSX2IPQ9Y2D8 AC144831.1-201ENST00000573312 2656 ntBASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 AC010491.1-201ENST00000563101 2797 ntBASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 CALR4P-201ENST00000431943 946 ntBASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SSX2IPQ9Y2D8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 AC022532.1-201ENST00000624563 1728 ntBASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 AC007787.1-201ENST00000588095 1583 ntBASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 KRT8P14-201ENST00000414254 1442 ntBASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.31■□□□□ 0.2
SSX2IPQ9Y2D8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms