Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 AP005019.2-201ENST00000615104 511 ntBASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 AC009542.2-202ENST00000619004 1067 ntBASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 MIR6869-201ENST00000619434 62 ntBASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 AL596257.1-201ENST00000641463 2694 ntBASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA1Q9UND3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 AC148477.4-201ENST00000613430 1793 ntBASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 AL138799.1-201ENST00000448213 1675 ntBASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA1Q9UND3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14□□□□□ -0.17
NPIPA1Q9UND3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPA1Q9UND3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPA1Q9UND3 PGGT1BP2-201ENST00000398621 1028 ntBASIC14□□□□□ -0.17
NPIPA1Q9UND3 RPL5P21-201ENST00000404620 815 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms