Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 DGCR9-201ENST00000609630 2415 ntBASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.61□□□□□ -0.07
CNOT11Q9UKZ1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 AC027612.1-201ENST00000445234 2395 ntBASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 SPTLC1P1-201ENST00000447199 261 ntBASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 TERF1P3-201ENST00000505638 1227 ntBASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.6□□□□□ -0.07
CNOT11Q9UKZ1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 AC018442.1-201ENST00000421439 2061 ntBASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 AC004461.2-201ENST00000629517 803 ntBASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CNOT11Q9UKZ1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms