Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 BTBD6P1-201ENST00000412176 1267 ntBASIC13.92□□□□□ -0.18
LRFN1Q9P244 FAM86HP-204ENST00000513466 959 ntBASIC13.92□□□□□ -0.18
LRFN1Q9P244 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 AC020658.6-201ENST00000623564 1870 ntBASIC13.92□□□□□ -0.18
LRFN1Q9P244 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.92□□□□□ -0.18
LRFN1Q9P244 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 GHSR-202ENST00000427970 912 ntBASIC13.91□□□□□ -0.18
LRFN1Q9P244 HLA-K-203ENST00000430151 1046 ntBASIC13.91□□□□□ -0.18
LRFN1Q9P244 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 EEF1DP1-201ENST00000585891 896 ntBASIC13.91□□□□□ -0.18
LRFN1Q9P244 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 GPR182-203ENST00000622922 591 ntBASIC13.91□□□□□ -0.18
LRFN1Q9P244 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.91□□□□□ -0.18
LRFN1Q9P244 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRFN1Q9P244 AL157414.3-201ENST00000624276 1954 ntBASIC13.91□□□□□ -0.18
LRFN1Q9P244 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 AL360270.3-201ENST00000609118 1348 ntBASIC13.9□□□□□ -0.18
LRFN1Q9P244 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 OR2I1P-209ENST00000641730 5365 ntBASIC13.9□□□□□ -0.18
LRFN1Q9P244 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 POM121L8P-201ENST00000417732 1281 ntBASIC13.9□□□□□ -0.18
LRFN1Q9P244 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.9□□□□□ -0.18
LRFN1Q9P244 MTX1P1-201ENST00000440904 838 ntBASIC13.9□□□□□ -0.18
LRFN1Q9P244 GOLGA2P4-201ENST00000441462 777 ntBASIC13.9□□□□□ -0.18
LRFN1Q9P244 POM121L9P-203ENST00000441984 1285 ntBASIC13.9□□□□□ -0.18
LRFN1Q9P244 CNN2P10-201ENST00000443067 918 ntBASIC13.9□□□□□ -0.18
LRFN1Q9P244 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRFN1Q9P244 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms