Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.46□□□□□ -0.09
CCDC88CQ9P219 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CCDC88CQ9P219 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.46□□□□□ -0.1
CCDC88CQ9P219 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 FO681548.1-201ENST00000455617 1132 ntBASIC14.46□□□□□ -0.1
CCDC88CQ9P219 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 SAMD11P1-201ENST00000571429 661 ntBASIC14.46□□□□□ -0.1
CCDC88CQ9P219 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CCDC88CQ9P219 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 RNA5SP412-201ENST00000516234 123 ntBASIC14.45□□□□□ -0.1
CCDC88CQ9P219 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 AC232323.1-201ENST00000540724 2099 ntBASIC14.45□□□□□ -0.1
CCDC88CQ9P219 REXO1L5P-201ENST00000622260 2098 ntBASIC14.45□□□□□ -0.1
CCDC88CQ9P219 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC88CQ9P219 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 AC078819.1-201ENST00000547454 765 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms