Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AC013268.4-201ENST00000637413 2228 ntBASIC13.3□□□□□ -0.28
CDH20Q9HBT6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AL645937.2-201ENST00000396808 931 ntBASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 KRT18P25-201ENST00000508931 1278 ntBASIC13.3□□□□□ -0.28
CDH20Q9HBT6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AP001063.1-201ENST00000568332 529 ntBASIC13.3□□□□□ -0.28
CDH20Q9HBT6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 AC007389.4-201ENST00000454674 793 ntBASIC13.29□□□□□ -0.28
CDH20Q9HBT6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 TDH-203ENST00000531764 1110 ntBASIC13.29□□□□□ -0.28
CDH20Q9HBT6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.29□□□□□ -0.28
CDH20Q9HBT6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 AC104581.4-201ENST00000623126 3052 ntBASIC13.29□□□□□ -0.28
CDH20Q9HBT6 AC093525.8-201ENST00000624099 1342 ntBASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDH20Q9HBT6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms