Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 BCYRN1-201ENST00000418539 200 ntBASIC16.25■□□□□ 0.19
NXF3Q9H4D5 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 AL451050.2-201ENST00000606967 682 ntBASIC16.25■□□□□ 0.19
NXF3Q9H4D5 AL139099.5-201ENST00000635274 300 ntBASIC16.25■□□□□ 0.19
NXF3Q9H4D5 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.25■□□□□ 0.19
NXF3Q9H4D5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.24■□□□□ 0.19
NXF3Q9H4D5 AC091804.1-201ENST00000486888 567 ntBASIC16.24■□□□□ 0.19
NXF3Q9H4D5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 AC126915.1-201ENST00000522847 1038 ntBASIC16.24■□□□□ 0.19
NXF3Q9H4D5 MIR4783-201ENST00000580343 82 ntBASIC16.24■□□□□ 0.19
NXF3Q9H4D5 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.24■□□□□ 0.19
NXF3Q9H4D5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NXF3Q9H4D5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms