Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AC112693.3-201ENST00000624819 1983 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 RPL8P2-201ENST00000430538 502 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 RPL13AP19-201ENST00000434320 584 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 AL035414.1-201ENST00000451327 857 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 GCOM2-201ENST00000509133 1104 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 AC005632.3-201ENST00000605544 308 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 AP001065.2-201ENST00000617205 644 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 FRMPD2B-201ENST00000431305 1347 ntBASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTFDC1Q9BY42 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 AC087481.3-201ENST00000602886 1894 ntBASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 NDUFS6P1-201ENST00000485187 316 ntBASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 CTBP2P4-201ENST00000513884 920 ntBASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 AC131206.1-201ENST00000538078 1211 ntBASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.1■□□□□ 0.49
RTFDC1Q9BY42 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 LINC01165-201ENST00000445190 1623 ntBASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 PKD1P1-201ENST00000458669 6805 ntBASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 XBP1P1-201ENST00000436573 652 ntBASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 MIR3188-201ENST00000583494 85 ntBASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 LINC01783-202ENST00000614408 828 ntBASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 BX284668.2-205ENST00000619677 828 ntBASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 AC133540.1-201ENST00000620845 1019 ntBASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTFDC1Q9BY42 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTFDC1Q9BY42 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms