Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AP006547.1-201ENST00000563435 692 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 MIR4741-201ENST00000579822 90 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 ECM1P1-201ENST00000604092 1279 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AL603764.1-201ENST00000636452 321 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AC232323.1-201ENST00000540724 2099 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 REXO1L5P-201ENST00000622260 2098 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AL158070.2-201ENST00000623713 1621 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC004898.1-201ENST00000451057 766 ntBASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC104306.2-201ENST00000451877 341 ntBASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 RPSAP36-202ENST00000494591 1261 ntBASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 KRT8P14-201ENST00000414254 1442 ntBASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC012508.2-201ENST00000567613 1472 ntBASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC015818.8-201ENST00000587907 1519 ntBASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AP001258.2-201ENST00000529891 490 ntBASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPAP1Q9BWH6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 AL359258.3-201ENST00000622910 2331 ntBASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPAP1Q9BWH6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms