Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 AL355385.1-201ENST00000606123 409 ntBASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 AL365330.1-201ENST00000607459 531 ntBASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 AC092902.6-201ENST00000641783 218 ntBASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NDUFAF3Q9BU61 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
NDUFAF3Q9BU61 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
NDUFAF3Q9BU61 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AC112693.3-201ENST00000624819 1983 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 TSEN15P1-201ENST00000423257 515 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AL645939.2-201ENST00000427340 991 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AC140658.5-201ENST00000438532 169 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 SPDYE11-202ENST00000450699 704 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 RN7SL589P-201ENST00000481268 310 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AC004449.1-201ENST00000564240 433 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 SPDYE9P-201ENST00000570642 692 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AL031055.1-201ENST00000606362 631 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 SPDYE10P-202ENST00000612005 668 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 SPDYE8P-202ENST00000612377 668 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 AL161645.1-201ENST00000622716 1255 ntBASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFAF3Q9BU61 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFAF3Q9BU61 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms