Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 LINC01115-203ENST00000606068 577 ntBASIC14.79□□□□□ -0.04
EBF4Q9BQW3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 LINC00628-201ENST00000628516 1289 ntBASIC14.79□□□□□ -0.04
EBF4Q9BQW3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 ACTG1P14-201ENST00000446382 1122 ntBASIC14.78□□□□□ -0.04
EBF4Q9BQW3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 AL079307.3-201ENST00000556114 283 ntBASIC14.78□□□□□ -0.04
EBF4Q9BQW3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 PPT1-213ENST00000641319 2388 ntBASIC14.78□□□□□ -0.04
EBF4Q9BQW3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 AC090505.1-201ENST00000430515 1834 ntBASIC14.78□□□□□ -0.04
EBF4Q9BQW3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EBF4Q9BQW3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EBF4Q9BQW3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 AL590627.1-203ENST00000421194 1026 ntBASIC14.77□□□□□ -0.05
EBF4Q9BQW3 MCCD1P2-201ENST00000423228 335 ntBASIC14.77□□□□□ -0.05
EBF4Q9BQW3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 KRT18P43-201ENST00000469825 1281 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms