Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 RARRES2P5-201ENST00000564013 466 ntBASIC14.16□□□□□ -0.14
TM9SF2Q99805 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 AC008494.3-201ENST00000606615 944 ntBASIC14.16□□□□□ -0.14
TM9SF2Q99805 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 AC018892.3-201ENST00000623986 2499 ntBASIC14.16□□□□□ -0.14
TM9SF2Q99805 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 DGCR5-201ENST00000399539 862 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 MYCLP2-201ENST00000449268 967 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 PHKG1P2-201ENST00000457537 863 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 RN7SL752P-201ENST00000463779 287 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 AC123567.1-201ENST00000548294 1261 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 RN7SL371P-201ENST00000578099 267 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 CHCHD2P3-201ENST00000603038 451 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 AC004790.1-201ENST00000612686 536 ntBASIC14.15□□□□□ -0.14
TM9SF2Q99805 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF2Q99805 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF2Q99805 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.15□□□□□ -0.15
TM9SF2Q99805 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TM9SF2Q99805 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
TM9SF2Q99805 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF2Q99805 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF2Q99805 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF2Q99805 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms