Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 BCRP4-201ENST00000506079 804 ntBASIC12.9□□□□□ -0.35
COL12A1Q99715 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC12.9□□□□□ -0.35
COL12A1Q99715 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.9□□□□□ -0.35
COL12A1Q99715 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
COL12A1Q99715 AC006986.1-201ENST00000612764 241 ntBASIC12.9□□□□□ -0.35
COL12A1Q99715 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.9□□□□□ -0.35
COL12A1Q99715 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC12.9□□□□□ -0.35
COL12A1Q99715 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
COL12A1Q99715 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.89□□□□□ -0.35
COL12A1Q99715 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
COL12A1Q99715 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.89□□□□□ -0.35
COL12A1Q99715 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.89□□□□□ -0.35
COL12A1Q99715 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.89□□□□□ -0.35
COL12A1Q99715 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.89□□□□□ -0.35
COL12A1Q99715 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.89□□□□□ -0.35
COL12A1Q99715 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 RPS18P9-201ENST00000482817 460 ntBASIC12.89□□□□□ -0.35
COL12A1Q99715 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.89□□□□□ -0.35
COL12A1Q99715 FBXO36P1-201ENST00000579006 471 ntBASIC12.89□□□□□ -0.35
COL12A1Q99715 AC020922.4-201ENST00000621389 339 ntBASIC12.89□□□□□ -0.35
COL12A1Q99715 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.89□□□□□ -0.35
COL12A1Q99715 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 AC006504.5-208ENST00000588784 2401 ntBASIC12.89□□□□□ -0.35
COL12A1Q99715 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
COL12A1Q99715 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 KRT18P46-201ENST00000435568 1279 ntBASIC12.89□□□□□ -0.35
COL12A1Q99715 AC006328.1-201ENST00000437571 379 ntBASIC12.89□□□□□ -0.35
COL12A1Q99715 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC12.89□□□□□ -0.35
COL12A1Q99715 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.89□□□□□ -0.35
COL12A1Q99715 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.89□□□□□ -0.35
COL12A1Q99715 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC12.89□□□□□ -0.35
COL12A1Q99715 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
COL12A1Q99715 MIEF1-215ENST00000637854 213 ntBASIC12.89□□□□□ -0.35
COL12A1Q99715 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.89□□□□□ -0.35
COL12A1Q99715 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL12A1Q99715 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.88□□□□□ -0.35
COL12A1Q99715 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.88□□□□□ -0.35
COL12A1Q99715 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 AC018629.1-201ENST00000623381 1736 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
COL12A1Q99715 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.88□□□□□ -0.35
COL12A1Q99715 RHOQP2-201ENST00000449922 579 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 AC006122.1-201ENST00000493323 440 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.88□□□□□ -0.35
COL12A1Q99715 AC010632.2-201ENST00000588369 1224 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 AC006116.2-201ENST00000589958 988 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.88□□□□□ -0.35
COL12A1Q99715 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
COL12A1Q99715 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL12A1Q99715 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.88□□□□□ -0.35
COL12A1Q99715 AC092580.1-201ENST00000433998 658 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 RN7SL300P-201ENST00000582522 318 ntBASIC12.88□□□□□ -0.35
COL12A1Q99715 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.88□□□□□ -0.35
COL12A1Q99715 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
COL12A1Q99715 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
COL12A1Q99715 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
COL12A1Q99715 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.88□□□□□ -0.35
COL12A1Q99715 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.87□□□□□ -0.35
COL12A1Q99715 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.87□□□□□ -0.35
COL12A1Q99715 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL12A1Q99715 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
COL12A1Q99715 PTGER4P2-201ENST00000328411 252 ntBASIC12.87□□□□□ -0.35
COL12A1Q99715 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms