Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 AC097065.1-201ENST00000425737 517 ntBASIC15.99■□□□□ 0.15
RAD9AQ99638 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.99■□□□□ 0.15
RAD9AQ99638 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.99■□□□□ 0.15
RAD9AQ99638 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.99■□□□□ 0.15
RAD9AQ99638 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.99■□□□□ 0.15
RAD9AQ99638 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.99■□□□□ 0.15
RAD9AQ99638 MEG3_2.1-201ENST00000611456 105 ntBASIC15.99■□□□□ 0.15
RAD9AQ99638 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 AC027601.3-201ENST00000622907 509 ntBASIC15.99■□□□□ 0.15
RAD9AQ99638 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.99■□□□□ 0.15
RAD9AQ99638 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAD9AQ99638 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.99■□□□□ 0.15
RAD9AQ99638 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.98■□□□□ 0.15
RAD9AQ99638 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 KRT18P66-201ENST00000452970 1269 ntBASIC15.98■□□□□ 0.15
RAD9AQ99638 ALG3P1-201ENST00000508806 1114 ntBASIC15.98■□□□□ 0.15
RAD9AQ99638 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.98■□□□□ 0.15
RAD9AQ99638 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 AC007881.3-201ENST00000608897 607 ntBASIC15.98■□□□□ 0.15
RAD9AQ99638 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 AC144522.1-201ENST00000625111 1658 ntBASIC15.98■□□□□ 0.15
RAD9AQ99638 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RAD9AQ99638 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAD9AQ99638 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.98■□□□□ 0.15
RAD9AQ99638 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAD9AQ99638 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.97■□□□□ 0.15
RAD9AQ99638 AC012508.2-201ENST00000567613 1472 ntBASIC15.97■□□□□ 0.15
RAD9AQ99638 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.97■□□□□ 0.15
RAD9AQ99638 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RAD9AQ99638 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.97■□□□□ 0.15
RAD9AQ99638 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.97■□□□□ 0.15
RAD9AQ99638 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAD9AQ99638 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAD9AQ99638 AL157407.1-201ENST00000435784 904 ntBASIC15.97■□□□□ 0.15
RAD9AQ99638 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.97■□□□□ 0.15
RAD9AQ99638 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RAD9AQ99638 IGHV3-37-201ENST00000518544 340 ntBASIC15.97■□□□□ 0.15
RAD9AQ99638 PHBP15-201ENST00000574228 665 ntBASIC15.97■□□□□ 0.15
RAD9AQ99638 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.97■□□□□ 0.15
RAD9AQ99638 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.97■□□□□ 0.15
RAD9AQ99638 MIR6756-201ENST00000616240 63 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms